Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubp1Q811S7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ubp1Q811S7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ubp1Q811S7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ubp1Q811S7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ubp1Q811S7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.14■□□□□ 0.65
Ubp1Q811S7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.14■□□□□ 0.65
Ubp1Q811S7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.14■□□□□ 0.65
Ubp1Q811S7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.14■□□□□ 0.65
Ubp1Q811S7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Gm40848-201ENSMUST00000221998 324 ntBASIC19.13■□□□□ 0.65
Ubp1Q811S7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubp1Q811S7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Gm26833-201ENSMUST00000180899 440 ntBASIC19.12■□□□□ 0.65
Ubp1Q811S7 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.12■□□□□ 0.65
Ubp1Q811S7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubp1Q811S7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.11■□□□□ 0.65
Ubp1Q811S7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Ubp1Q811S7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubp1Q811S7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubp1Q811S7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubp1Q811S7 Gm15039-201ENSMUST00000118914 875 ntBASIC19.1■□□□□ 0.65
Ubp1Q811S7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ubp1Q811S7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubp1Q811S7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ubp1Q811S7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubp1Q811S7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.09■□□□□ 0.65
Ubp1Q811S7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubp1Q811S7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubp1Q811S7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubp1Q811S7 Gm11421-201ENSMUST00000122124 294 ntBASIC19.08■□□□□ 0.64
Ubp1Q811S7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms