Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim50Q810I2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim50Q810I2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim50Q810I2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim50Q810I2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim50Q810I2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.94■□□□□ 0.62
Trim50Q810I2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim50Q810I2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
Trim50Q810I2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Trim50Q810I2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim50Q810I2 AA386476-201ENSMUST00000098781 1665 ntBASIC18.94■□□□□ 0.62
Trim50Q810I2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim50Q810I2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim50Q810I2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim50Q810I2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.93■□□□□ 0.62
Trim50Q810I2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Trim50Q810I2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Trim50Q810I2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim50Q810I2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Trim50Q810I2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim50Q810I2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trim50Q810I2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim50Q810I2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim50Q810I2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Trim50Q810I2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim50Q810I2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim50Q810I2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Trim50Q810I2 Gm43173-201ENSMUST00000202246 593 ntBASIC18.91■□□□□ 0.62
Trim50Q810I2 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.91■□□□□ 0.62
Trim50Q810I2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Gm6139-201ENSMUST00000079261 882 ntBASIC18.91■□□□□ 0.62
Trim50Q810I2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.91■□□□□ 0.62
Trim50Q810I2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim50Q810I2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim50Q810I2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim50Q810I2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim50Q810I2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim50Q810I2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim50Q810I2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim50Q810I2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim50Q810I2 Gm8493-201ENSMUST00000196881 489 ntBASIC18.9■□□□□ 0.62
Trim50Q810I2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim50Q810I2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim50Q810I2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim50Q810I2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim50Q810I2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim50Q810I2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim50Q810I2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim50Q810I2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trim50Q810I2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim50Q810I2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim50Q810I2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Trim50Q810I2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trim50Q810I2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim50Q810I2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trim50Q810I2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim50Q810I2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim50Q810I2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms