Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.21■■□□□ 1.15
Trnp1Q80ZI1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Trnp1Q80ZI1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Trnp1Q80ZI1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trnp1Q80ZI1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Trnp1Q80ZI1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.2■■□□□ 1.14
Trnp1Q80ZI1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.2■■□□□ 1.14
Trnp1Q80ZI1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trnp1Q80ZI1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trnp1Q80ZI1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Trnp1Q80ZI1 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.2■■□□□ 1.14
Trnp1Q80ZI1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
Trnp1Q80ZI1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Trnp1Q80ZI1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trnp1Q80ZI1 Gm27275-201ENSMUST00000184318 272 ntBASIC22.18■■□□□ 1.14
Trnp1Q80ZI1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trnp1Q80ZI1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Trnp1Q80ZI1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trnp1Q80ZI1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trnp1Q80ZI1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trnp1Q80ZI1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 AA386476-201ENSMUST00000098781 1665 ntBASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Gm13836-201ENSMUST00000121159 501 ntBASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trnp1Q80ZI1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trnp1Q80ZI1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trnp1Q80ZI1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trnp1Q80ZI1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trnp1Q80ZI1 Gm5643-201ENSMUST00000117081 966 ntBASIC22.14■■□□□ 1.13
Trnp1Q80ZI1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.14■■□□□ 1.13
Trnp1Q80ZI1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trnp1Q80ZI1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trnp1Q80ZI1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.14■■□□□ 1.13
Trnp1Q80ZI1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trnp1Q80ZI1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trnp1Q80ZI1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Gm12896-201ENSMUST00000118430 226 ntBASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.12■■□□□ 1.13
Trnp1Q80ZI1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trnp1Q80ZI1 Gm6576-201ENSMUST00000169678 883 ntBASIC22.11■■□□□ 1.13
Trnp1Q80ZI1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trnp1Q80ZI1 Gm7860-201ENSMUST00000121190 879 ntBASIC22.1■■□□□ 1.13
Trnp1Q80ZI1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trnp1Q80ZI1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trnp1Q80ZI1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms