Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vrk1Q80X41 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.55■□□□□ 0.56
Vrk1Q80X41 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.55■□□□□ 0.56
Vrk1Q80X41 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vrk1Q80X41 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.54■□□□□ 0.56
Vrk1Q80X41 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vrk1Q80X41 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.53■□□□□ 0.56
Vrk1Q80X41 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vrk1Q80X41 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vrk1Q80X41 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Vrk1Q80X41 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vrk1Q80X41 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vrk1Q80X41 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vrk1Q80X41 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vrk1Q80X41 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vrk1Q80X41 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vrk1Q80X41 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.51■□□□□ 0.55
Vrk1Q80X41 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vrk1Q80X41 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.5■□□□□ 0.55
Vrk1Q80X41 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vrk1Q80X41 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vrk1Q80X41 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vrk1Q80X41 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms