Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm3Q80WV7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.21■□□□□ 0.83
Srrm3Q80WV7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.2■□□□□ 0.82
Srrm3Q80WV7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.19■□□□□ 0.82
Srrm3Q80WV7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.19■□□□□ 0.82
Srrm3Q80WV7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Srrm3Q80WV7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Srrm3Q80WV7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.19■□□□□ 0.82
Srrm3Q80WV7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Srrm3Q80WV7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 BC021767-201ENSMUST00000126387 1716 ntBASIC20.18■□□□□ 0.82
Srrm3Q80WV7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm3Q80WV7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm3Q80WV7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.17■□□□□ 0.82
Srrm3Q80WV7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.17■□□□□ 0.82
Srrm3Q80WV7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.17■□□□□ 0.82
Srrm3Q80WV7 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.17■□□□□ 0.82
Srrm3Q80WV7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm3Q80WV7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm3Q80WV7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm3Q80WV7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Srrm3Q80WV7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm3Q80WV7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm3Q80WV7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm3Q80WV7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm3Q80WV7 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.15■□□□□ 0.82
Srrm3Q80WV7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm3Q80WV7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm3Q80WV7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Srrm3Q80WV7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm3Q80WV7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.13■□□□□ 0.81
Srrm3Q80WV7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm3Q80WV7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms