Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otop1Q80VM9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.65■□□□□ 0.58
Otop1Q80VM9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Gm8520-201ENSMUST00000186517 868 ntBASIC18.65■□□□□ 0.58
Otop1Q80VM9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otop1Q80VM9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Otop1Q80VM9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otop1Q80VM9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otop1Q80VM9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Otop1Q80VM9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otop1Q80VM9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Otop1Q80VM9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Otop1Q80VM9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Otop1Q80VM9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Otop1Q80VM9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Otop1Q80VM9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Otop1Q80VM9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otop1Q80VM9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.61■□□□□ 0.57
Otop1Q80VM9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otop1Q80VM9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otop1Q80VM9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Otop1Q80VM9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Otop1Q80VM9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otop1Q80VM9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otop1Q80VM9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.6■□□□□ 0.57
Otop1Q80VM9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otop1Q80VM9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otop1Q80VM9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.59■□□□□ 0.57
Otop1Q80VM9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otop1Q80VM9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Gm13148-201ENSMUST00000118892 745 ntBASIC18.58■□□□□ 0.56
Otop1Q80VM9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Otop1Q80VM9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms