Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim62Q80V85 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim62Q80V85 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Trim62Q80V85 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim62Q80V85 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Trim62Q80V85 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim62Q80V85 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim62Q80V85 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim62Q80V85 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim62Q80V85 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim62Q80V85 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim62Q80V85 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Trim62Q80V85 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim62Q80V85 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim62Q80V85 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim62Q80V85 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim62Q80V85 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim62Q80V85 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim62Q80V85 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim62Q80V85 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Trim62Q80V85 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim62Q80V85 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.13■□□□□ 0.81
Trim62Q80V85 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.13■□□□□ 0.81
Trim62Q80V85 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim62Q80V85 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim62Q80V85 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Trim62Q80V85 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim62Q80V85 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim62Q80V85 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim62Q80V85 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Trim62Q80V85 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim62Q80V85 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim62Q80V85 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Trim62Q80V85 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim62Q80V85 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim62Q80V85 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim62Q80V85 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim62Q80V85 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim62Q80V85 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim62Q80V85 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim62Q80V85 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim62Q80V85 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim62Q80V85 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim62Q80V85 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim62Q80V85 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim62Q80V85 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.1■□□□□ 0.81
Trim62Q80V85 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim62Q80V85 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim62Q80V85 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim62Q80V85 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim62Q80V85 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim62Q80V85 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim62Q80V85 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim62Q80V85 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim62Q80V85 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim62Q80V85 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim62Q80V85 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim62Q80V85 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim62Q80V85 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim62Q80V85 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim62Q80V85 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim62Q80V85 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim62Q80V85 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim62Q80V85 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim62Q80V85 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim62Q80V85 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Trim62Q80V85 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim62Q80V85 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim62Q80V85 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim62Q80V85 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms