Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh19Q80TF3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 AV356131-201ENSMUST00000206201 750 ntBASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 Gm10033-202ENSMUST00000211874 928 ntBASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.09■□□□□ 0.65
Pcdh19Q80TF3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh19Q80TF3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh19Q80TF3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.08■□□□□ 0.65
Pcdh19Q80TF3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh19Q80TF3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh19Q80TF3 Gm10849-201ENSMUST00000100397 618 ntBASIC19.08■□□□□ 0.64
Pcdh19Q80TF3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh19Q80TF3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.08■□□□□ 0.64
Pcdh19Q80TF3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh19Q80TF3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Pcdh19Q80TF3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh19Q80TF3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.08■□□□□ 0.64
Pcdh19Q80TF3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh19Q80TF3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh19Q80TF3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh19Q80TF3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh19Q80TF3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 Reep4-203ENSMUST00000226563 1444 ntBASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh19Q80TF3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdh19Q80TF3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdh19Q80TF3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms