Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ush1gQ80T11 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ush1gQ80T11 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Ush1gQ80T11 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ush1gQ80T11 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.33■■□□□ 1.01
Ush1gQ80T11 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ush1gQ80T11 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ush1gQ80T11 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ush1gQ80T11 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ush1gQ80T11 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.32■■□□□ 1
Ush1gQ80T11 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ush1gQ80T11 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.32■■□□□ 1
Ush1gQ80T11 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.32■■□□□ 1
Ush1gQ80T11 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.32■■□□□ 1
Ush1gQ80T11 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ush1gQ80T11 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Ush1gQ80T11 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ush1gQ80T11 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ush1gQ80T11 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Ush1gQ80T11 Gm27801-201ENSMUST00000184174 223 ntBASIC21.31■■□□□ 1
Ush1gQ80T11 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.31■■□□□ 1
Ush1gQ80T11 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Ush1gQ80T11 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ush1gQ80T11 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ush1gQ80T11 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ush1gQ80T11 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ush1gQ80T11 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ush1gQ80T11 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.3■■□□□ 1
Ush1gQ80T11 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Ush1gQ80T11 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.3■■□□□ 1
Ush1gQ80T11 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ush1gQ80T11 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ush1gQ80T11 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ush1gQ80T11 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.29■■□□□ 1
Ush1gQ80T11 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Ush1gQ80T11 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ush1gQ80T11 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ush1gQ80T11 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.28■■□□□ 1
Ush1gQ80T11 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ush1gQ80T11 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ush1gQ80T11 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ush1gQ80T11 Reep4-203ENSMUST00000226563 1444 ntBASIC21.27■■□□□ 1
Ush1gQ80T11 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.27■■□□□ 1
Ush1gQ80T11 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ush1gQ80T11 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.27■□□□□ 0.99
Ush1gQ80T11 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.27■□□□□ 0.99
Ush1gQ80T11 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ush1gQ80T11 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Ush1gQ80T11 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ush1gQ80T11 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.24■□□□□ 0.99
Ush1gQ80T11 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.24■□□□□ 0.99
Ush1gQ80T11 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ush1gQ80T11 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ush1gQ80T11 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms