Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pif1Q80SX8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pif1Q80SX8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pif1Q80SX8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.91■□□□□ 0.46
Pif1Q80SX8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pif1Q80SX8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.91■□□□□ 0.46
Pif1Q80SX8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pif1Q80SX8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pif1Q80SX8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.91■□□□□ 0.46
Pif1Q80SX8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pif1Q80SX8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pif1Q80SX8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.91■□□□□ 0.46
Pif1Q80SX8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pif1Q80SX8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pif1Q80SX8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.9■□□□□ 0.46
Pif1Q80SX8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.9■□□□□ 0.46
Pif1Q80SX8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pif1Q80SX8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pif1Q80SX8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pif1Q80SX8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pif1Q80SX8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pif1Q80SX8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.88■□□□□ 0.45
Pif1Q80SX8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pif1Q80SX8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pif1Q80SX8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pif1Q80SX8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pif1Q80SX8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pif1Q80SX8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pif1Q80SX8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.87■□□□□ 0.45
Pif1Q80SX8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.87■□□□□ 0.45
Pif1Q80SX8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pif1Q80SX8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pif1Q80SX8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pif1Q80SX8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pif1Q80SX8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pif1Q80SX8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms