Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otub1Q7TQI3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.48■□□□□ 0.55
Otub1Q7TQI3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otub1Q7TQI3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Otub1Q7TQI3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Otub1Q7TQI3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otub1Q7TQI3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otub1Q7TQI3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otub1Q7TQI3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otub1Q7TQI3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms