Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf139Q7TMV1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rnf139Q7TMV1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf139Q7TMV1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rnf139Q7TMV1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf139Q7TMV1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf139Q7TMV1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf139Q7TMV1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf139Q7TMV1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf139Q7TMV1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf139Q7TMV1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf139Q7TMV1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf139Q7TMV1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Rnf139Q7TMV1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf139Q7TMV1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf139Q7TMV1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf139Q7TMV1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf139Q7TMV1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.82■□□□□ 0.92
Rnf139Q7TMV1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf139Q7TMV1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf139Q7TMV1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Gm43060-201ENSMUST00000200621 289 ntBASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf139Q7TMV1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms