Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox11Q7M6Y2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox11Q7M6Y2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox11Q7M6Y2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox11Q7M6Y2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.67■□□□□ 0.74
Sox11Q7M6Y2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sox11Q7M6Y2 Gm22240-201ENSMUST00000175225 82 ntBASIC19.67■□□□□ 0.74
Sox11Q7M6Y2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox11Q7M6Y2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sox11Q7M6Y2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox11Q7M6Y2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox11Q7M6Y2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox11Q7M6Y2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sox11Q7M6Y2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Gm8520-201ENSMUST00000186517 868 ntBASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox11Q7M6Y2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox11Q7M6Y2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Gm7290-201ENSMUST00000104990 617 ntBASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Gm12918-201ENSMUST00000120234 636 ntBASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Gm15710-201ENSMUST00000121821 636 ntBASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Gm5075-201ENSMUST00000196916 622 ntBASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox11Q7M6Y2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms