Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm8Q6ZWM4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.47■□□□□ 0.87
Lsm8Q6ZWM4 Golph3-202ENSMUST00000226517 2359 ntBASIC20.47■□□□□ 0.87
Lsm8Q6ZWM4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm8Q6ZWM4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm8Q6ZWM4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm8Q6ZWM4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm8Q6ZWM4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.46■□□□□ 0.87
Lsm8Q6ZWM4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
Lsm8Q6ZWM4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm8Q6ZWM4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Smad6-203ENSMUST00000179458 273 ntBASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Gm6139-201ENSMUST00000079261 882 ntBASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm8Q6ZWM4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm8Q6ZWM4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.44■□□□□ 0.86
Lsm8Q6ZWM4 Gm45417-201ENSMUST00000209533 758 ntBASIC20.44■□□□□ 0.86
Lsm8Q6ZWM4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm8Q6ZWM4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm8Q6ZWM4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm8Q6ZWM4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm8Q6ZWM4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm8Q6ZWM4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.42■□□□□ 0.86
Lsm8Q6ZWM4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm8Q6ZWM4 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.42■□□□□ 0.86
Lsm8Q6ZWM4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm8Q6ZWM4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.41■□□□□ 0.86
Lsm8Q6ZWM4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm8Q6ZWM4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.41■□□□□ 0.86
Lsm8Q6ZWM4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.41■□□□□ 0.86
Lsm8Q6ZWM4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm8Q6ZWM4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Lsm8Q6ZWM4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm8Q6ZWM4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm8Q6ZWM4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm8Q6ZWM4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm8Q6ZWM4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Lsm8Q6ZWM4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lsm8Q6ZWM4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Gm11421-201ENSMUST00000122124 294 ntBASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm8Q6ZWM4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm8Q6ZWM4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.38■□□□□ 0.85
Lsm8Q6ZWM4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lsm8Q6ZWM4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm8Q6ZWM4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm8Q6ZWM4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm8Q6ZWM4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm8Q6ZWM4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm8Q6ZWM4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Lsm8Q6ZWM4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm8Q6ZWM4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Lsm8Q6ZWM4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms