Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm26524-201ENSMUST00000192339 390 ntBASIC22.38■■□□□ 1.17
Ddx55Q6ZPL9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.38■■□□□ 1.17
Ddx55Q6ZPL9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx55Q6ZPL9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Ddx55Q6ZPL9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx55Q6ZPL9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx55Q6ZPL9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx55Q6ZPL9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx55Q6ZPL9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx55Q6ZPL9 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Trmt13-210ENSMUST00000198454 880 ntBASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Gm10812-201ENSMUST00000099864 546 ntBASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Ddx55Q6ZPL9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Ddx55Q6ZPL9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx55Q6ZPL9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.33■■□□□ 1.17
Ddx55Q6ZPL9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ddx55Q6ZPL9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.33■■□□□ 1.17
Ddx55Q6ZPL9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx55Q6ZPL9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ddx55Q6ZPL9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx55Q6ZPL9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Mir7071-201ENSMUST00000184847 69 ntBASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.3■■□□□ 1.16
Ddx55Q6ZPL9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx55Q6ZPL9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx55Q6ZPL9 Rab3c-203ENSMUST00000224180 967 ntBASIC22.29■■□□□ 1.16
Ddx55Q6ZPL9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ddx55Q6ZPL9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx55Q6ZPL9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx55Q6ZPL9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx55Q6ZPL9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx55Q6ZPL9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx55Q6ZPL9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.28■■□□□ 1.16
Ddx55Q6ZPL9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms