Protein–RNA interactions for Protein: Q6PHU5

Sort1, Sortilin, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1Q6PHU5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.22■□□□□ 0.67
Sort1Q6PHU5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sort1Q6PHU5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sort1Q6PHU5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sort1Q6PHU5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sort1Q6PHU5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sort1Q6PHU5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.21■□□□□ 0.67
Sort1Q6PHU5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sort1Q6PHU5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Sort1Q6PHU5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sort1Q6PHU5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.2■□□□□ 0.66
Sort1Q6PHU5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sort1Q6PHU5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sort1Q6PHU5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sort1Q6PHU5 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.2■□□□□ 0.66
Sort1Q6PHU5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sort1Q6PHU5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sort1Q6PHU5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.18■□□□□ 0.66
Sort1Q6PHU5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.18■□□□□ 0.66
Sort1Q6PHU5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sort1Q6PHU5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sort1Q6PHU5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.16■□□□□ 0.66
Sort1Q6PHU5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sort1Q6PHU5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sort1Q6PHU5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sort1Q6PHU5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Sort1Q6PHU5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sort1Q6PHU5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.14■□□□□ 0.65
Sort1Q6PHU5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Sort1Q6PHU5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sort1Q6PHU5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sort1Q6PHU5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sort1Q6PHU5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms