Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarca1Q6PGB8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Gm18284-201ENSMUST00000172604 624 ntBASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca1Q6PGB8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca1Q6PGB8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Smarca1Q6PGB8 Smad6-203ENSMUST00000179458 273 ntBASIC21.66■■□□□ 1.06
Smarca1Q6PGB8 Gm8495-201ENSMUST00000188740 694 ntBASIC21.66■■□□□ 1.06
Smarca1Q6PGB8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.66■■□□□ 1.06
Smarca1Q6PGB8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca1Q6PGB8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca1Q6PGB8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca1Q6PGB8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca1Q6PGB8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca1Q6PGB8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca1Q6PGB8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Gm43060-201ENSMUST00000200621 289 ntBASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca1Q6PGB8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca1Q6PGB8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca1Q6PGB8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca1Q6PGB8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca1Q6PGB8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca1Q6PGB8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca1Q6PGB8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms