Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snrnp40Q6PE01 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Snrnp40Q6PE01 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Snrnp40Q6PE01 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Trmt13-210ENSMUST00000198454 880 ntBASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Snrnp40Q6PE01 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp40Q6PE01 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Snrnp40Q6PE01 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Gm22325-201ENSMUST00000158904 308 ntBASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp40Q6PE01 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 AA386476-201ENSMUST00000098781 1665 ntBASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp40Q6PE01 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Snrnp40Q6PE01 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp40Q6PE01 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms