Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm15710-201ENSMUST00000121821 636 ntBASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Gm5075-201ENSMUST00000196916 622 ntBASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chd4Q6PDQ2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Chd4Q6PDQ2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Chd4Q6PDQ2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Chd4Q6PDQ2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Chd4Q6PDQ2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Chd4Q6PDQ2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
Chd4Q6PDQ2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC25.84■■□□□ 1.73
Chd4Q6PDQ2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC25.84■■□□□ 1.73
Chd4Q6PDQ2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Chd4Q6PDQ2 AC122769.4-201ENSMUST00000228166 901 ntBASIC25.84■■□□□ 1.73
Chd4Q6PDQ2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Chd4Q6PDQ2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Chd4Q6PDQ2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Chd4Q6PDQ2 Gm6365-201ENSMUST00000054711 744 ntBASIC25.82■■□□□ 1.72
Chd4Q6PDQ2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Chd4Q6PDQ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
Chd4Q6PDQ2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chd4Q6PDQ2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chd4Q6PDQ2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chd4Q6PDQ2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC25.81■■□□□ 1.72
Chd4Q6PDQ2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Chd4Q6PDQ2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chd4Q6PDQ2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chd4Q6PDQ2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Chd4Q6PDQ2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 Gm12527-201ENSMUST00000117967 564 ntBASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Chd4Q6PDQ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Chd4Q6PDQ2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Gm7860-201ENSMUST00000121190 879 ntBASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chd4Q6PDQ2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Chd4Q6PDQ2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
Chd4Q6PDQ2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC25.76■■□□□ 1.71
Chd4Q6PDQ2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC25.75■■□□□ 1.71
Chd4Q6PDQ2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Gm5408-201ENSMUST00000197998 747 ntBASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Chd4Q6PDQ2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms