Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.12■□□□□ 0.81
Rtl3Q6P1Y1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rtl3Q6P1Y1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl3Q6P1Y1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl3Q6P1Y1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtl3Q6P1Y1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rtl3Q6P1Y1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl3Q6P1Y1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
Rtl3Q6P1Y1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl3Q6P1Y1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl3Q6P1Y1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.08■□□□□ 0.81
Rtl3Q6P1Y1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl3Q6P1Y1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl3Q6P1Y1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rtl3Q6P1Y1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.08■□□□□ 0.81
Rtl3Q6P1Y1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl3Q6P1Y1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtl3Q6P1Y1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtl3Q6P1Y1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl3Q6P1Y1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Gm7291-201ENSMUST00000199147 382 ntBASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl3Q6P1Y1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.05■□□□□ 0.8
Rtl3Q6P1Y1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtl3Q6P1Y1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms