Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.91■□□□□ 0.94
ChpfQ6IQX7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ChpfQ6IQX7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 AA386476-201ENSMUST00000098781 1665 ntBASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChpfQ6IQX7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ChpfQ6IQX7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.89■□□□□ 0.94
ChpfQ6IQX7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ChpfQ6IQX7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ChpfQ6IQX7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.89■□□□□ 0.94
ChpfQ6IQX7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ChpfQ6IQX7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ChpfQ6IQX7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ChpfQ6IQX7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ChpfQ6IQX7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ChpfQ6IQX7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ChpfQ6IQX7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChpfQ6IQX7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Gm4968-201ENSMUST00000071458 858 ntBASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ChpfQ6IQX7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ChpfQ6IQX7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChpfQ6IQX7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ChpfQ6IQX7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ChpfQ6IQX7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChpfQ6IQX7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChpfQ6IQX7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChpfQ6IQX7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Gm6420-201ENSMUST00000193885 723 ntBASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.84■□□□□ 0.93
ChpfQ6IQX7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms