Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Gm45640-201ENSMUST00000210665 1896 ntBASIC20■□□□□ 0.79
Krt42Q6IFX2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Krt42Q6IFX2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Krt42Q6IFX2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Krt42Q6IFX2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Krt42Q6IFX2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt42Q6IFX2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Gm12366-201ENSMUST00000121722 873 ntBASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Gm5786-201ENSMUST00000085368 882 ntBASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt42Q6IFX2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
Krt42Q6IFX2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt42Q6IFX2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.94■□□□□ 0.78
Krt42Q6IFX2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.94■□□□□ 0.78
Krt42Q6IFX2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Krt42Q6IFX2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms