Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VclQ64727 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VclQ64727 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.11■□□□□ 0.65
VclQ64727 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.11■□□□□ 0.65
VclQ64727 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VclQ64727 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.11■□□□□ 0.65
VclQ64727 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VclQ64727 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VclQ64727 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VclQ64727 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.1■□□□□ 0.65
VclQ64727 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.1■□□□□ 0.65
VclQ64727 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.1■□□□□ 0.65
VclQ64727 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VclQ64727 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VclQ64727 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
VclQ64727 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VclQ64727 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VclQ64727 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VclQ64727 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.09■□□□□ 0.65
VclQ64727 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.09■□□□□ 0.65
VclQ64727 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VclQ64727 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VclQ64727 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VclQ64727 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VclQ64727 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VclQ64727 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.08■□□□□ 0.64
VclQ64727 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VclQ64727 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VclQ64727 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VclQ64727 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VclQ64727 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VclQ64727 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.07■□□□□ 0.64
VclQ64727 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VclQ64727 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
VclQ64727 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VclQ64727 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VclQ64727 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VclQ64727 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
VclQ64727 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VclQ64727 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VclQ64727 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.06■□□□□ 0.64
VclQ64727 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VclQ64727 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VclQ64727 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VclQ64727 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VclQ64727 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VclQ64727 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VclQ64727 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VclQ64727 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.06■□□□□ 0.64
VclQ64727 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.06■□□□□ 0.64
VclQ64727 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VclQ64727 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.05■□□□□ 0.64
VclQ64727 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VclQ64727 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VclQ64727 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VclQ64727 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VclQ64727 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.05■□□□□ 0.64
VclQ64727 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
VclQ64727 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VclQ64727 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VclQ64727 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VclQ64727 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VclQ64727 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VclQ64727 AA386476-201ENSMUST00000098781 1665 ntBASIC19.05■□□□□ 0.64
VclQ64727 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
VclQ64727 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VclQ64727 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VclQ64727 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VclQ64727 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.04■□□□□ 0.64
VclQ64727 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.04■□□□□ 0.64
VclQ64727 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VclQ64727 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VclQ64727 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms