Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc3Q64519 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc3Q64519 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc3Q64519 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc3Q64519 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Sdc3Q64519 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Sdc3Q64519 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.63■□□□□ 0.57
Sdc3Q64519 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sdc3Q64519 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Sdc3Q64519 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sdc3Q64519 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc3Q64519 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc3Q64519 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc3Q64519 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc3Q64519 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc3Q64519 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc3Q64519 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc3Q64519 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.61■□□□□ 0.57
Sdc3Q64519 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc3Q64519 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc3Q64519 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc3Q64519 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sdc3Q64519 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sdc3Q64519 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.6■□□□□ 0.57
Sdc3Q64519 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sdc3Q64519 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc3Q64519 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.59■□□□□ 0.57
Sdc3Q64519 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sdc3Q64519 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.59■□□□□ 0.57
Sdc3Q64519 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sdc3Q64519 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc3Q64519 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc3Q64519 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sdc3Q64519 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc3Q64519 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc3Q64519 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Sdc3Q64519 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc3Q64519 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.58■□□□□ 0.56
Sdc3Q64519 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
Sdc3Q64519 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc3Q64519 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc3Q64519 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sdc3Q64519 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc3Q64519 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc3Q64519 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc3Q64519 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sdc3Q64519 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sdc3Q64519 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.57■□□□□ 0.56
Sdc3Q64519 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sdc3Q64519 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc3Q64519 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sdc3Q64519 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sdc3Q64519 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.56■□□□□ 0.56
Sdc3Q64519 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.56■□□□□ 0.56
Sdc3Q64519 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sdc3Q64519 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sdc3Q64519 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.56■□□□□ 0.56
Sdc3Q64519 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.56■□□□□ 0.56
Sdc3Q64519 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.56■□□□□ 0.56
Sdc3Q64519 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc3Q64519 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms