Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd47Q61735 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd47Q61735 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd47Q61735 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.63■□□□□ 0.41
Cd47Q61735 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.63■□□□□ 0.41
Cd47Q61735 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.63■□□□□ 0.41
Cd47Q61735 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd47Q61735 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd47Q61735 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd47Q61735 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cd47Q61735 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.62■□□□□ 0.41
Cd47Q61735 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd47Q61735 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd47Q61735 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd47Q61735 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd47Q61735 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cd47Q61735 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd47Q61735 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cd47Q61735 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd47Q61735 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd47Q61735 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd47Q61735 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.61■□□□□ 0.41
Cd47Q61735 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd47Q61735 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd47Q61735 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cd47Q61735 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd47Q61735 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cd47Q61735 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd47Q61735 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.6■□□□□ 0.41
Cd47Q61735 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Cd47Q61735 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd47Q61735 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.6■□□□□ 0.41
Cd47Q61735 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cd47Q61735 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd47Q61735 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cd47Q61735 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd47Q61735 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd47Q61735 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd47Q61735 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.59■□□□□ 0.41
Cd47Q61735 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cd47Q61735 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cd47Q61735 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd47Q61735 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd47Q61735 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd47Q61735 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd47Q61735 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.58■□□□□ 0.41
Cd47Q61735 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd47Q61735 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cd47Q61735 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd47Q61735 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cd47Q61735 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd47Q61735 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd47Q61735 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Cd47Q61735 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd47Q61735 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd47Q61735 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd47Q61735 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cd47Q61735 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cd47Q61735 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cd47Q61735 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd47Q61735 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd47Q61735 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd47Q61735 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.57■□□□□ 0.4
Cd47Q61735 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cd47Q61735 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd47Q61735 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.56■□□□□ 0.4
Cd47Q61735 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd47Q61735 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd47Q61735 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd47Q61735 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd47Q61735 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd47Q61735 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms