Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox17Q61473 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox17Q61473 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox17Q61473 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sox17Q61473 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.24■□□□□ 0.51
Sox17Q61473 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.24■□□□□ 0.51
Sox17Q61473 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sox17Q61473 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Sox17Q61473 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox17Q61473 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sox17Q61473 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.23■□□□□ 0.51
Sox17Q61473 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Gm10399-202ENSMUST00000202768 748 ntBASIC18.23■□□□□ 0.51
Sox17Q61473 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sox17Q61473 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox17Q61473 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.23■□□□□ 0.51
Sox17Q61473 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox17Q61473 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox17Q61473 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox17Q61473 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.22■□□□□ 0.51
Sox17Q61473 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.22■□□□□ 0.51
Sox17Q61473 Mir6538-201ENSMUST00000183713 110 ntBASIC18.22■□□□□ 0.51
Sox17Q61473 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Sox17Q61473 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox17Q61473 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sox17Q61473 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox17Q61473 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sox17Q61473 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox17Q61473 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sox17Q61473 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sox17Q61473 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sox17Q61473 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox17Q61473 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sox17Q61473 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.2■□□□□ 0.5
Sox17Q61473 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.2■□□□□ 0.5
Sox17Q61473 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox17Q61473 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.19■□□□□ 0.5
Sox17Q61473 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.19■□□□□ 0.5
Sox17Q61473 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox17Q61473 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox17Q61473 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sox17Q61473 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Sox17Q61473 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.18■□□□□ 0.5
Sox17Q61473 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox17Q61473 Mir6236-201ENSMUST00000184437 123 ntBASIC18.18■□□□□ 0.5
Sox17Q61473 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sox17Q61473 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox17Q61473 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms