Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.3■□□□□ 0.68
Cacna1eQ61290 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1eQ61290 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.3■□□□□ 0.68
Cacna1eQ61290 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cacna1eQ61290 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1eQ61290 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1eQ61290 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1eQ61290 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.3■□□□□ 0.68
Cacna1eQ61290 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1eQ61290 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Gm5408-201ENSMUST00000197998 747 ntBASIC19.29■□□□□ 0.68
Cacna1eQ61290 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.29■□□□□ 0.68
Cacna1eQ61290 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1eQ61290 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1eQ61290 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.28■□□□□ 0.68
Cacna1eQ61290 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.28■□□□□ 0.68
Cacna1eQ61290 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.28■□□□□ 0.68
Cacna1eQ61290 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.28■□□□□ 0.68
Cacna1eQ61290 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1eQ61290 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1eQ61290 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.27■□□□□ 0.68
Cacna1eQ61290 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1eQ61290 Gm20049-201ENSMUST00000219950 730 ntBASIC19.27■□□□□ 0.68
Cacna1eQ61290 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1eQ61290 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Gm37856-201ENSMUST00000191634 999 ntBASIC19.26■□□□□ 0.67
Cacna1eQ61290 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.26■□□□□ 0.67
Cacna1eQ61290 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1eQ61290 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1eQ61290 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Cacna1eQ61290 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cacna1eQ61290 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.25■□□□□ 0.67
Cacna1eQ61290 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1eQ61290 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1eQ61290 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1eQ61290 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1eQ61290 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1eQ61290 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1eQ61290 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1eQ61290 Gm20760-201ENSMUST00000179197 648 ntBASIC19.24■□□□□ 0.67
Cacna1eQ61290 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1eQ61290 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cacna1eQ61290 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1eQ61290 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1eQ61290 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1eQ61290 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.23■□□□□ 0.67
Cacna1eQ61290 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1eQ61290 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.22■□□□□ 0.67
Cacna1eQ61290 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1eQ61290 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1eQ61290 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1eQ61290 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.22■□□□□ 0.67
Cacna1eQ61290 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1eQ61290 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1eQ61290 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.21■□□□□ 0.67
Cacna1eQ61290 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms