Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.01■□□□□ 0.79
Slc6a4Q60857 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.01■□□□□ 0.79
Slc6a4Q60857 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a4Q60857 AV356131-201ENSMUST00000206201 750 ntBASIC20■□□□□ 0.79
Slc6a4Q60857 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a4Q60857 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20■□□□□ 0.79
Slc6a4Q60857 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc6a4Q60857 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc6a4Q60857 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a4Q60857 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Gm13234-201ENSMUST00000120010 747 ntBASIC19.98■□□□□ 0.79
Slc6a4Q60857 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a4Q60857 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.97■□□□□ 0.79
Slc6a4Q60857 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.97■□□□□ 0.79
Slc6a4Q60857 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Slc6a4Q60857 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.97■□□□□ 0.79
Slc6a4Q60857 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a4Q60857 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a4Q60857 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.96■□□□□ 0.79
Slc6a4Q60857 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a4Q60857 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a4Q60857 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Slc6a4Q60857 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.95■□□□□ 0.78
Slc6a4Q60857 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.95■□□□□ 0.78
Slc6a4Q60857 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.95■□□□□ 0.78
Slc6a4Q60857 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.94■□□□□ 0.78
Slc6a4Q60857 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a4Q60857 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a4Q60857 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a4Q60857 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms