Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk1Q60855 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk1Q60855 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk1Q60855 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk1Q60855 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk1Q60855 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Ripk1Q60855 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk1Q60855 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.29■□□□□ 0.52
Ripk1Q60855 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.29■□□□□ 0.52
Ripk1Q60855 Gm21956-201ENSMUST00000179946 522 ntBASIC18.29■□□□□ 0.52
Ripk1Q60855 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.29■□□□□ 0.52
Ripk1Q60855 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk1Q60855 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk1Q60855 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ripk1Q60855 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Ripk1Q60855 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.29■□□□□ 0.52
Ripk1Q60855 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk1Q60855 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk1Q60855 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ripk1Q60855 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.28■□□□□ 0.52
Ripk1Q60855 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ripk1Q60855 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ripk1Q60855 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.28■□□□□ 0.52
Ripk1Q60855 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk1Q60855 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.27■□□□□ 0.52
Ripk1Q60855 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ripk1Q60855 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.27■□□□□ 0.52
Ripk1Q60855 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.27■□□□□ 0.52
Ripk1Q60855 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Ripk1Q60855 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ripk1Q60855 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.26■□□□□ 0.51
Ripk1Q60855 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.26■□□□□ 0.51
Ripk1Q60855 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ripk1Q60855 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Ripk1Q60855 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ripk1Q60855 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk1Q60855 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ripk1Q60855 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.25■□□□□ 0.51
Ripk1Q60855 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 Gm43137-201ENSMUST00000198052 594 ntBASIC18.25■□□□□ 0.51
Ripk1Q60855 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk1Q60855 AA386476-201ENSMUST00000098781 1665 ntBASIC18.25■□□□□ 0.51
Ripk1Q60855 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ripk1Q60855 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ripk1Q60855 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ripk1Q60855 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ripk1Q60855 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ripk1Q60855 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.24■□□□□ 0.51
Ripk1Q60855 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Ripk1Q60855 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ripk1Q60855 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ripk1Q60855 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ripk1Q60855 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.23■□□□□ 0.51
Ripk1Q60855 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ripk1Q60855 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ripk1Q60855 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ripk1Q60855 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Ripk1Q60855 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ripk1Q60855 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.23■□□□□ 0.51
Ripk1Q60855 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.23■□□□□ 0.51
Ripk1Q60855 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ripk1Q60855 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ripk1Q60855 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ripk1Q60855 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ripk1Q60855 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ripk1Q60855 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ripk1Q60855 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ripk1Q60855 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ripk1Q60855 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ripk1Q60855 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ripk1Q60855 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Ripk1Q60855 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.22■□□□□ 0.51
Ripk1Q60855 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Ripk1Q60855 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Ripk1Q60855 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ripk1Q60855 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ripk1Q60855 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms