Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Lrrk2Q5S006 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.23■□□□□ 0.35
Lrrk2Q5S006 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrk2Q5S006 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrk2Q5S006 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrk2Q5S006 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Mir1199-201ENSMUST00000117015 119 ntBASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.22■□□□□ 0.35
Lrrk2Q5S006 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Gm10231-201ENSMUST00000181584 441 ntBASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Gm10175-202ENSMUST00000208752 441 ntBASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Gm7367-201ENSMUST00000057611 492 ntBASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrk2Q5S006 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lrrk2Q5S006 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrk2Q5S006 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.19■□□□□ 0.34
Lrrk2Q5S006 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrk2Q5S006 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Lrrk2Q5S006 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrk2Q5S006 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.19■□□□□ 0.34
Lrrk2Q5S006 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
Lrrk2Q5S006 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrk2Q5S006 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrk2Q5S006 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Lrrk2Q5S006 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrk2Q5S006 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrk2Q5S006 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Gm15378-201ENSMUST00000121894 207 ntBASIC17.16■□□□□ 0.34
Lrrk2Q5S006 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrk2Q5S006 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms