Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav5d-4Q5R1F6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5d-4Q5R1F6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav5d-4Q5R1F6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5d-4Q5R1F6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5d-4Q5R1F6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5d-4Q5R1F6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5d-4Q5R1F6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Gm13241-201ENSMUST00000094493 780 ntBASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5d-4Q5R1F6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav5d-4Q5R1F6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav5d-4Q5R1F6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Gm21956-201ENSMUST00000179946 522 ntBASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Gm43137-201ENSMUST00000198052 594 ntBASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5d-4Q5R1F6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5d-4Q5R1F6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5d-4Q5R1F6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms