Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.23■□□□□ 0.67
Scn2bQ56A07 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.23■□□□□ 0.67
Scn2bQ56A07 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Scn2bQ56A07 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.22■□□□□ 0.67
Scn2bQ56A07 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn2bQ56A07 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.21■□□□□ 0.67
Scn2bQ56A07 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Golgb1-201ENSMUST00000023534 498 ntBASIC19.21■□□□□ 0.67
Scn2bQ56A07 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn2bQ56A07 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Golph3-205ENSMUST00000228671 2842 ntBASIC19.2■□□□□ 0.66
Scn2bQ56A07 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn2bQ56A07 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn2bQ56A07 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scn2bQ56A07 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn2bQ56A07 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scn2bQ56A07 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.19■□□□□ 0.66
Scn2bQ56A07 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn2bQ56A07 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.19■□□□□ 0.66
Scn2bQ56A07 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn2bQ56A07 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.17■□□□□ 0.66
Scn2bQ56A07 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.17■□□□□ 0.66
Scn2bQ56A07 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn2bQ56A07 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn2bQ56A07 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn2bQ56A07 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn2bQ56A07 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn2bQ56A07 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn2bQ56A07 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn2bQ56A07 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn2bQ56A07 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn2bQ56A07 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn2bQ56A07 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.16■□□□□ 0.66
Scn2bQ56A07 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn2bQ56A07 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn2bQ56A07 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms