Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cracr2aQ3UP38 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Gm40848-201ENSMUST00000221998 324 ntBASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.12■□□□□ 0.97
Cracr2aQ3UP38 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Cracr2aQ3UP38 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cracr2aQ3UP38 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cracr2aQ3UP38 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cracr2aQ3UP38 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cracr2aQ3UP38 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cracr2aQ3UP38 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cracr2aQ3UP38 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.09■□□□□ 0.97
Cracr2aQ3UP38 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.08■□□□□ 0.97
Cracr2aQ3UP38 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.08■□□□□ 0.96
Cracr2aQ3UP38 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cracr2aQ3UP38 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cracr2aQ3UP38 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Gm18284-201ENSMUST00000172604 624 ntBASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cracr2aQ3UP38 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms