Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Usp30Q3UN04 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp30Q3UN04 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp30Q3UN04 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Usp30Q3UN04 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.59■□□□□ 0.73
Usp30Q3UN04 Gm13146-201ENSMUST00000118508 780 ntBASIC19.59■□□□□ 0.73
Usp30Q3UN04 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp30Q3UN04 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp30Q3UN04 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp30Q3UN04 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.59■□□□□ 0.73
Usp30Q3UN04 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp30Q3UN04 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp30Q3UN04 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp30Q3UN04 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp30Q3UN04 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp30Q3UN04 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.57■□□□□ 0.72
Usp30Q3UN04 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp30Q3UN04 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.57■□□□□ 0.72
Usp30Q3UN04 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp30Q3UN04 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp30Q3UN04 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.55■□□□□ 0.72
Usp30Q3UN04 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp30Q3UN04 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp30Q3UN04 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Usp30Q3UN04 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp30Q3UN04 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.54■□□□□ 0.72
Usp30Q3UN04 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Usp30Q3UN04 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Usp30Q3UN04 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Usp30Q3UN04 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Usp30Q3UN04 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp30Q3UN04 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp30Q3UN04 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.52■□□□□ 0.72
Usp30Q3UN04 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.52■□□□□ 0.72
Usp30Q3UN04 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp30Q3UN04 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Usp30Q3UN04 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.51■□□□□ 0.71
Usp30Q3UN04 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms