Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Rnf44Q3UHJ8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf44Q3UHJ8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf44Q3UHJ8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Gm11421-201ENSMUST00000122124 294 ntBASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf44Q3UHJ8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf44Q3UHJ8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf44Q3UHJ8 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.78■□□□□ 0.6
Rnf44Q3UHJ8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf44Q3UHJ8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf44Q3UHJ8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf44Q3UHJ8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 Gm15039-201ENSMUST00000118914 875 ntBASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf44Q3UHJ8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf44Q3UHJ8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf44Q3UHJ8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf44Q3UHJ8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Gm43060-201ENSMUST00000200621 289 ntBASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf44Q3UHJ8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf44Q3UHJ8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf44Q3UHJ8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.73■□□□□ 0.59
Rnf44Q3UHJ8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.73■□□□□ 0.59
Rnf44Q3UHJ8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rnf44Q3UHJ8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf44Q3UHJ8 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.73■□□□□ 0.59
Rnf44Q3UHJ8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms