Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Q3U1D9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.9■□□□□ 0.3
Q3U1D9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.9■□□□□ 0.3
Q3U1D9 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.9■□□□□ 0.3
Q3U1D9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3U1D9 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.9■□□□□ 0.3
Q3U1D9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.89■□□□□ 0.3
Q3U1D9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.89■□□□□ 0.29
Q3U1D9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.89■□□□□ 0.29
Q3U1D9 Gm29257-201ENSMUST00000186115 639 ntBASIC16.89■□□□□ 0.29
Q3U1D9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.89■□□□□ 0.29
Q3U1D9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.89■□□□□ 0.29
Q3U1D9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3U1D9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.88■□□□□ 0.29
Q3U1D9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Q3U1D9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Q3U1D9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.88■□□□□ 0.29
Q3U1D9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.88■□□□□ 0.29
Q3U1D9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Q3U1D9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Q3U1D9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Q3U1D9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3U1D9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Notumos-201ENSMUST00000151998 2659 ntBASIC16.87■□□□□ 0.29
Q3U1D9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.87■□□□□ 0.29
Q3U1D9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.87■□□□□ 0.29
Q3U1D9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.87■□□□□ 0.29
Q3U1D9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3U1D9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Q3U1D9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3U1D9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Q3U1D9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Q3U1D9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Q3U1D9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Q3U1D9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Q3U1D9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Q3U1D9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Q3U1D9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.85■□□□□ 0.29
Q3U1D9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.85■□□□□ 0.29
Q3U1D9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Q3U1D9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Q3U1D9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3U1D9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Q3U1D9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.84■□□□□ 0.29
Q3U1D9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.84■□□□□ 0.29
Q3U1D9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Q3U1D9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.84■□□□□ 0.29
Q3U1D9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.84■□□□□ 0.29
Q3U1D9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
Q3U1D9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Q3U1D9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.84■□□□□ 0.29
Q3U1D9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Q3U1D9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Q3U1D9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms