Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd8Q09XV5 Gm7889-201ENSMUST00000185591 958 ntBASIC17.71■□□□□ 0.43
Chd8Q09XV5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd8Q09XV5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd8Q09XV5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd8Q09XV5 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.7■□□□□ 0.42
Chd8Q09XV5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd8Q09XV5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd8Q09XV5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chd8Q09XV5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd8Q09XV5 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.7■□□□□ 0.42
Chd8Q09XV5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Gm38205-201ENSMUST00000192243 258 ntBASIC17.69■□□□□ 0.42
Chd8Q09XV5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Gm30025-201ENSMUST00000218555 728 ntBASIC17.69■□□□□ 0.42
Chd8Q09XV5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd8Q09XV5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd8Q09XV5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd8Q09XV5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.68■□□□□ 0.42
Chd8Q09XV5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd8Q09XV5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.67■□□□□ 0.42
Chd8Q09XV5 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.67■□□□□ 0.42
Chd8Q09XV5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.67■□□□□ 0.42
Chd8Q09XV5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd8Q09XV5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.66■□□□□ 0.42
Chd8Q09XV5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd8Q09XV5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd8Q09XV5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd8Q09XV5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Chd8Q09XV5 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.65■□□□□ 0.42
Chd8Q09XV5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd8Q09XV5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd8Q09XV5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd8Q09XV5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd8Q09XV5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd8Q09XV5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chd8Q09XV5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd8Q09XV5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.63■□□□□ 0.41
Chd8Q09XV5 Gm11539-201ENSMUST00000119837 557 ntBASIC17.63■□□□□ 0.41
Chd8Q09XV5 Gm13436-201ENSMUST00000120418 567 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms