Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col6a2Q02788 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.44■□□□□ 0.7
Col6a2Q02788 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a2Q02788 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a2Q02788 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a2Q02788 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.44■□□□□ 0.7
Col6a2Q02788 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a2Q02788 Gm18671-201ENSMUST00000214826 683 ntBASIC19.44■□□□□ 0.7
Col6a2Q02788 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col6a2Q02788 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a2Q02788 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a2Q02788 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.43■□□□□ 0.7
Col6a2Q02788 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Col6a2Q02788 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col6a2Q02788 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.43■□□□□ 0.7
Col6a2Q02788 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.43■□□□□ 0.7
Col6a2Q02788 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col6a2Q02788 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col6a2Q02788 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a2Q02788 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.42■□□□□ 0.7
Col6a2Q02788 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.42■□□□□ 0.7
Col6a2Q02788 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a2Q02788 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a2Q02788 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a2Q02788 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a2Q02788 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a2Q02788 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a2Q02788 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a2Q02788 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Col6a2Q02788 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col6a2Q02788 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col6a2Q02788 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a2Q02788 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Col6a2Q02788 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a2Q02788 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.4■□□□□ 0.7
Col6a2Q02788 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a2Q02788 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Col6a2Q02788 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a2Q02788 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.4■□□□□ 0.7
Col6a2Q02788 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a2Q02788 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a2Q02788 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a2Q02788 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col6a2Q02788 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col6a2Q02788 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col6a2Q02788 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col6a2Q02788 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col6a2Q02788 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.39■□□□□ 0.69
Col6a2Q02788 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a2Q02788 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a2Q02788 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a2Q02788 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col6a2Q02788 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.39■□□□□ 0.69
Col6a2Q02788 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a2Q02788 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col6a2Q02788 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a2Q02788 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a2Q02788 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.38■□□□□ 0.69
Col6a2Q02788 Gm10033-202ENSMUST00000211874 928 ntBASIC19.38■□□□□ 0.69
Col6a2Q02788 Reep4-203ENSMUST00000226563 1444 ntBASIC19.38■□□□□ 0.69
Col6a2Q02788 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a2Q02788 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a2Q02788 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a2Q02788 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a2Q02788 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a2Q02788 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col6a2Q02788 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a2Q02788 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.37■□□□□ 0.69
Col6a2Q02788 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.37■□□□□ 0.69
Col6a2Q02788 Gm7291-201ENSMUST00000199147 382 ntBASIC19.37■□□□□ 0.69
Col6a2Q02788 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a2Q02788 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col6a2Q02788 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Col6a2Q02788 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a2Q02788 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a2Q02788 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a2Q02788 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a2Q02788 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a2Q02788 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a2Q02788 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a2Q02788 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms