Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca2P97929 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca2P97929 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Brca2P97929 Gm27741-201ENSMUST00000185060 237 ntBASIC19.07■□□□□ 0.64
Brca2P97929 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Brca2P97929 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Brca2P97929 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.06■□□□□ 0.64
Brca2P97929 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.05■□□□□ 0.64
Brca2P97929 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.05■□□□□ 0.64
Brca2P97929 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Gm11643-201ENSMUST00000119578 864 ntBASIC19.05■□□□□ 0.64
Brca2P97929 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.05■□□□□ 0.64
Brca2P97929 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Brca2P97929 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Brca2P97929 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca2P97929 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca2P97929 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca2P97929 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.04■□□□□ 0.64
Brca2P97929 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca2P97929 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Brca2P97929 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca2P97929 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.04■□□□□ 0.64
Brca2P97929 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Brca2P97929 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca2P97929 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca2P97929 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca2P97929 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.03■□□□□ 0.64
Brca2P97929 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.03■□□□□ 0.64
Brca2P97929 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca2P97929 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca2P97929 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.03■□□□□ 0.64
Brca2P97929 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.03■□□□□ 0.64
Brca2P97929 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Brca2P97929 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca2P97929 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Brca2P97929 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Brca2P97929 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca2P97929 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Brca2P97929 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca2P97929 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Brca2P97929 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca2P97929 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Brca2P97929 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Brca2P97929 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Brca2P97929 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Brca2P97929 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Brca2P97929 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Brca2P97929 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca2P97929 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.01■□□□□ 0.63
Brca2P97929 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.01■□□□□ 0.63
Brca2P97929 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca2P97929 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca2P97929 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca2P97929 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca2P97929 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca2P97929 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca2P97929 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Brca2P97929 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19■□□□□ 0.63
Brca2P97929 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Brca2P97929 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca2P97929 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca2P97929 Gm20634-201ENSMUST00000090779 2956 ntBASIC19■□□□□ 0.63
Brca2P97929 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca2P97929 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca2P97929 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19■□□□□ 0.63
Brca2P97929 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Brca2P97929 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Brca2P97929 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca2P97929 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca2P97929 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca2P97929 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca2P97929 Gm13146-201ENSMUST00000118508 780 ntBASIC18.99■□□□□ 0.63
Brca2P97929 Gm6211-202ENSMUST00000167849 925 ntBASIC18.99■□□□□ 0.63
Brca2P97929 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Brca2P97929 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca2P97929 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Brca2P97929 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Brca2P97929 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca2P97929 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Brca2P97929 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.98■□□□□ 0.63
Brca2P97929 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca2P97929 Gm18101-201ENSMUST00000215769 548 ntBASIC18.98■□□□□ 0.63
Brca2P97929 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca2P97929 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca2P97929 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca2P97929 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Brca2P97929 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca2P97929 Gm5643-201ENSMUST00000117081 966 ntBASIC18.97■□□□□ 0.63
Brca2P97929 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Brca2P97929 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.97■□□□□ 0.63
Brca2P97929 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Brca2P97929 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca2P97929 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms