Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smn1P97801 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smn1P97801 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.64■□□□□ 0.25
Smn1P97801 Gm40881-201ENSMUST00000223397 166 ntBASIC16.64■□□□□ 0.25
Smn1P97801 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smn1P97801 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smn1P97801 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smn1P97801 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smn1P97801 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.64■□□□□ 0.25
Smn1P97801 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Smn1P97801 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smn1P97801 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smn1P97801 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smn1P97801 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smn1P97801 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smn1P97801 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smn1P97801 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smn1P97801 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smn1P97801 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smn1P97801 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smn1P97801 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smn1P97801 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.63■□□□□ 0.25
Smn1P97801 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smn1P97801 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smn1P97801 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.62■□□□□ 0.25
Smn1P97801 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.62■□□□□ 0.25
Smn1P97801 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Smn1P97801 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smn1P97801 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Smn1P97801 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.61■□□□□ 0.25
Smn1P97801 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Smn1P97801 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.61■□□□□ 0.25
Smn1P97801 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smn1P97801 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smn1P97801 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smn1P97801 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smn1P97801 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smn1P97801 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smn1P97801 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.6■□□□□ 0.25
Smn1P97801 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smn1P97801 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smn1P97801 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Smn1P97801 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smn1P97801 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smn1P97801 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smn1P97801 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smn1P97801 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smn1P97801 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Smn1P97801 Gm43530-201ENSMUST00000195920 274 ntBASIC16.59■□□□□ 0.25
Smn1P97801 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.59■□□□□ 0.25
Smn1P97801 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Smn1P97801 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smn1P97801 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Smn1P97801 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Smn1P97801 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Smn1P97801 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smn1P97801 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smn1P97801 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smn1P97801 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.58■□□□□ 0.24
Smn1P97801 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smn1P97801 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smn1P97801 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smn1P97801 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smn1P97801 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smn1P97801 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smn1P97801 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smn1P97801 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smn1P97801 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smn1P97801 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.57■□□□□ 0.24
Smn1P97801 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smn1P97801 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smn1P97801 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smn1P97801 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smn1P97801 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smn1P97801 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms