Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smad5P97454 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smad5P97454 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smad5P97454 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Smad5P97454 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smad5P97454 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smad5P97454 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smad5P97454 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smad5P97454 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Smad5P97454 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.4■□□□□ 0.54
Smad5P97454 Smad6-203ENSMUST00000179458 273 ntBASIC18.4■□□□□ 0.54
Smad5P97454 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.4■□□□□ 0.54
Smad5P97454 Gm26571-201ENSMUST00000181399 666 ntBASIC18.4■□□□□ 0.54
Smad5P97454 Gm27405-201ENSMUST00000184201 112 ntBASIC18.4■□□□□ 0.54
Smad5P97454 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.4■□□□□ 0.54
Smad5P97454 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.4■□□□□ 0.54
Smad5P97454 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Smad5P97454 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad5P97454 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smad5P97454 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smad5P97454 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smad5P97454 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.39■□□□□ 0.53
Smad5P97454 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.39■□□□□ 0.53
Smad5P97454 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.39■□□□□ 0.53
Smad5P97454 Gm40848-201ENSMUST00000221998 324 ntBASIC18.39■□□□□ 0.53
Smad5P97454 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.39■□□□□ 0.53
Smad5P97454 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smad5P97454 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Smad5P97454 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.39■□□□□ 0.53
Smad5P97454 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Smad5P97454 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad5P97454 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Smad5P97454 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.38■□□□□ 0.53
Smad5P97454 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smad5P97454 Gm42569-201ENSMUST00000200539 472 ntBASIC18.38■□□□□ 0.53
Smad5P97454 Gm42642-201ENSMUST00000200683 355 ntBASIC18.38■□□□□ 0.53
Smad5P97454 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smad5P97454 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smad5P97454 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smad5P97454 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smad5P97454 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad5P97454 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 Gm10849-201ENSMUST00000100397 618 ntBASIC18.37■□□□□ 0.53
Smad5P97454 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.37■□□□□ 0.53
Smad5P97454 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.37■□□□□ 0.53
Smad5P97454 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.37■□□□□ 0.53
Smad5P97454 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smad5P97454 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.37■□□□□ 0.53
Smad5P97454 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad5P97454 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Smad5P97454 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smad5P97454 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smad5P97454 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smad5P97454 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smad5P97454 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smad5P97454 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smad5P97454 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smad5P97454 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms