Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Trim43cP86449 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43cP86449 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Trim43cP86449 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43cP86449 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43cP86449 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43cP86449 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43cP86449 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trim43cP86449 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Trim43cP86449 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43cP86449 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43cP86449 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43cP86449 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43cP86449 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43cP86449 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43cP86449 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Trim43cP86449 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43cP86449 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Trim43cP86449 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43cP86449 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43cP86449 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43cP86449 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim43cP86449 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim43cP86449 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Trim43cP86449 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trim43cP86449 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43cP86449 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim43cP86449 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.2■□□□□ 0.98
Trim43cP86449 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43cP86449 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43cP86449 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43cP86449 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43cP86449 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43cP86449 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Trim43cP86449 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43cP86449 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Trim43cP86449 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim43cP86449 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43cP86449 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Trim43cP86449 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43cP86449 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim43cP86449 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43cP86449 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43cP86449 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43cP86449 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.19■□□□□ 0.98
Trim43cP86449 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43cP86449 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43cP86449 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43cP86449 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43cP86449 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Trim43cP86449 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43cP86449 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Trim43cP86449 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim43cP86449 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim43cP86449 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43cP86449 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43cP86449 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.17■□□□□ 0.98
Trim43cP86449 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.17■□□□□ 0.98
Trim43cP86449 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trim43cP86449 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43cP86449 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43cP86449 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43cP86449 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43cP86449 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43cP86449 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43cP86449 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.16■□□□□ 0.98
Trim43cP86449 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim43cP86449 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43cP86449 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43cP86449 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim43cP86449 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.15■□□□□ 0.98
Trim43cP86449 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim43cP86449 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim43cP86449 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim43cP86449 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim43cP86449 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim43cP86449 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim43cP86449 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim43cP86449 Gm43017-201ENSMUST00000198296 752 ntBASIC21.14■□□□□ 0.97
Trim43cP86449 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim43cP86449 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim43cP86449 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim43cP86449 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim43cP86449 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms