Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgcbP82349 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcbP82349 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SgcbP82349 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SgcbP82349 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcbP82349 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SgcbP82349 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SgcbP82349 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcbP82349 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SgcbP82349 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SgcbP82349 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SgcbP82349 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.35■□□□□ 0.37
SgcbP82349 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.35■□□□□ 0.37
SgcbP82349 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SgcbP82349 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.35■□□□□ 0.37
SgcbP82349 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcbP82349 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SgcbP82349 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SgcbP82349 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SgcbP82349 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SgcbP82349 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcbP82349 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.34■□□□□ 0.37
SgcbP82349 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SgcbP82349 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcbP82349 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcbP82349 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcbP82349 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcbP82349 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SgcbP82349 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcbP82349 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.33■□□□□ 0.37
SgcbP82349 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcbP82349 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SgcbP82349 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcbP82349 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SgcbP82349 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcbP82349 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SgcbP82349 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SgcbP82349 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.33■□□□□ 0.36
SgcbP82349 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcbP82349 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.32■□□□□ 0.36
SgcbP82349 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.32■□□□□ 0.36
SgcbP82349 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.32■□□□□ 0.36
SgcbP82349 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcbP82349 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SgcbP82349 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcbP82349 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcbP82349 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcbP82349 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.31■□□□□ 0.36
SgcbP82349 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.31■□□□□ 0.36
SgcbP82349 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcbP82349 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcbP82349 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SgcbP82349 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgcbP82349 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgcbP82349 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgcbP82349 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.3■□□□□ 0.36
SgcbP82349 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgcbP82349 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.3■□□□□ 0.36
SgcbP82349 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.3■□□□□ 0.36
SgcbP82349 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.3■□□□□ 0.36
SgcbP82349 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgcbP82349 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgcbP82349 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SgcbP82349 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgcbP82349 AA386476-201ENSMUST00000098781 1665 ntBASIC17.29■□□□□ 0.36
SgcbP82349 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.29■□□□□ 0.36
SgcbP82349 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.29■□□□□ 0.36
SgcbP82349 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.29■□□□□ 0.36
SgcbP82349 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.29■□□□□ 0.36
SgcbP82349 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcbP82349 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SgcbP82349 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms