Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Casp4P70343 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Casp4P70343 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Casp4P70343 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.3■□□□□ 0.84
Casp4P70343 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.3■□□□□ 0.84
Casp4P70343 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Casp4P70343 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casp4P70343 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Casp4P70343 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Casp4P70343 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.29■□□□□ 0.84
Casp4P70343 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Casp4P70343 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casp4P70343 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casp4P70343 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casp4P70343 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casp4P70343 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Casp4P70343 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casp4P70343 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casp4P70343 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.28■□□□□ 0.84
Casp4P70343 Mir7075-201ENSMUST00000184187 82 ntBASIC20.28■□□□□ 0.84
Casp4P70343 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casp4P70343 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.28■□□□□ 0.84
Casp4P70343 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.28■□□□□ 0.84
Casp4P70343 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casp4P70343 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.27■□□□□ 0.84
Casp4P70343 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casp4P70343 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Casp4P70343 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Casp4P70343 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casp4P70343 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Casp4P70343 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Casp4P70343 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.26■□□□□ 0.83
Casp4P70343 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Casp4P70343 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casp4P70343 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casp4P70343 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.25■□□□□ 0.83
Casp4P70343 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Casp4P70343 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Casp4P70343 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casp4P70343 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casp4P70343 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Casp4P70343 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casp4P70343 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.24■□□□□ 0.83
Casp4P70343 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.24■□□□□ 0.83
Casp4P70343 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Casp4P70343 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casp4P70343 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Casp4P70343 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Casp4P70343 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Casp4P70343 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Casp4P70343 Gm6139-201ENSMUST00000079261 882 ntBASIC20.23■□□□□ 0.83
Casp4P70343 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Casp4P70343 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casp4P70343 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Casp4P70343 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casp4P70343 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casp4P70343 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
Casp4P70343 Serp2-204ENSMUST00000228055 705 ntBASIC20.22■□□□□ 0.83
Casp4P70343 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
Casp4P70343 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Casp4P70343 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casp4P70343 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Casp4P70343 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Casp4P70343 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms