Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.16■□□□□ 0.66
Lhx1P63006 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx1P63006 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lhx1P63006 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.15■□□□□ 0.66
Lhx1P63006 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.15■□□□□ 0.66
Lhx1P63006 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
Lhx1P63006 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx1P63006 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lhx1P63006 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.14■□□□□ 0.65
Lhx1P63006 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx1P63006 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx1P63006 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx1P63006 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.14■□□□□ 0.65
Lhx1P63006 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx1P63006 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx1P63006 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx1P63006 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.13■□□□□ 0.65
Lhx1P63006 Gm18671-201ENSMUST00000214826 683 ntBASIC19.13■□□□□ 0.65
Lhx1P63006 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.13■□□□□ 0.65
Lhx1P63006 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx1P63006 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx1P63006 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx1P63006 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx1P63006 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx1P63006 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx1P63006 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Lhx1P63006 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx1P63006 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx1P63006 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx1P63006 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx1P63006 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Lhx1P63006 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lhx1P63006 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Lhx1P63006 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx1P63006 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx1P63006 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx1P63006 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lhx1P63006 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lhx1P63006 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx1P63006 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.1■□□□□ 0.65
Lhx1P63006 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.1■□□□□ 0.65
Lhx1P63006 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.1■□□□□ 0.65
Lhx1P63006 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Lhx1P63006 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx1P63006 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx1P63006 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.09■□□□□ 0.65
Lhx1P63006 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Lhx1P63006 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx1P63006 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Lhx1P63006 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx1P63006 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx1P63006 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx1P63006 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx1P63006 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Lhx1P63006 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx1P63006 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lhx1P63006 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lhx1P63006 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lhx1P63006 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.08■□□□□ 0.64
Lhx1P63006 Gm13234-201ENSMUST00000120010 747 ntBASIC19.08■□□□□ 0.64
Lhx1P63006 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.08■□□□□ 0.64
Lhx1P63006 Gm10033-202ENSMUST00000211874 928 ntBASIC19.08■□□□□ 0.64
Lhx1P63006 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.08■□□□□ 0.64
Lhx1P63006 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx1P63006 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lhx1P63006 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.08■□□□□ 0.64
Lhx1P63006 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx1P63006 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lhx1P63006 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Lhx1P63006 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx1P63006 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx1P63006 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx1P63006 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx1P63006 Gm42569-201ENSMUST00000200539 472 ntBASIC19.07■□□□□ 0.64
Lhx1P63006 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lhx1P63006 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms