Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm6P62313 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lsm6P62313 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm6P62313 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm6P62313 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.04■□□□□ 0.32
Lsm6P62313 Serp2-204ENSMUST00000228055 705 ntBASIC17.04■□□□□ 0.32
Lsm6P62313 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Lsm6P62313 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Lsm6P62313 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm6P62313 Golph3-202ENSMUST00000226517 2359 ntBASIC17.03■□□□□ 0.32
Lsm6P62313 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm6P62313 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm6P62313 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm6P62313 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Lsm6P62313 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm6P62313 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lsm6P62313 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsm6P62313 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm6P62313 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm6P62313 Gm12821-201ENSMUST00000120022 600 ntBASIC17.01■□□□□ 0.31
Lsm6P62313 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.01■□□□□ 0.31
Lsm6P62313 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.01■□□□□ 0.31
Lsm6P62313 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.01■□□□□ 0.31
Lsm6P62313 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.01■□□□□ 0.31
Lsm6P62313 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm6P62313 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm6P62313 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.01■□□□□ 0.31
Lsm6P62313 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lsm6P62313 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lsm6P62313 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm6P62313 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm6P62313 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm6P62313 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Lsm6P62313 Gm43545-201ENSMUST00000196765 2779 ntBASIC17■□□□□ 0.31
Lsm6P62313 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm6P62313 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm6P62313 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm6P62313 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17■□□□□ 0.31
Lsm6P62313 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm6P62313 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm6P62313 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm6P62313 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm6P62313 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lsm6P62313 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm6P62313 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm6P62313 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lsm6P62313 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lsm6P62313 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.99■□□□□ 0.31
Lsm6P62313 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm6P62313 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm6P62313 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm6P62313 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm6P62313 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.98■□□□□ 0.31
Lsm6P62313 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm6P62313 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Lsm6P62313 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Lsm6P62313 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm6P62313 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Lsm6P62313 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm6P62313 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.97■□□□□ 0.31
Lsm6P62313 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Lsm6P62313 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Gm12251-201ENSMUST00000117893 792 ntBASIC16.97■□□□□ 0.31
Lsm6P62313 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Lsm6P62313 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.97■□□□□ 0.31
Lsm6P62313 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Lsm6P62313 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm6P62313 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.96■□□□□ 0.31
Lsm6P62313 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Lsm6P62313 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Mir7075-201ENSMUST00000184187 82 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms