Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Sec61a1P61620 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a1P61620 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a1P61620 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a1P61620 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a1P61620 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sec61a1P61620 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sec61a1P61620 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sec61a1P61620 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.02■□□□□ 0.32
Sec61a1P61620 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.02■□□□□ 0.32
Sec61a1P61620 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
Sec61a1P61620 Golph3-205ENSMUST00000228671 2842 ntBASIC17.02■□□□□ 0.32
Sec61a1P61620 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sec61a1P61620 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a1P61620 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.02■□□□□ 0.31
Sec61a1P61620 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a1P61620 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Sec61a1P61620 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Sec61a1P61620 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.01■□□□□ 0.31
Sec61a1P61620 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.01■□□□□ 0.31
Sec61a1P61620 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.01■□□□□ 0.31
Sec61a1P61620 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Sec61a1P61620 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sec61a1P61620 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sec61a1P61620 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.01■□□□□ 0.31
Sec61a1P61620 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a1P61620 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.01■□□□□ 0.31
Sec61a1P61620 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sec61a1P61620 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Sec61a1P61620 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Sec61a1P61620 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17■□□□□ 0.31
Sec61a1P61620 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a1P61620 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sec61a1P61620 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sec61a1P61620 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17■□□□□ 0.31
Sec61a1P61620 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sec61a1P61620 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a1P61620 Gm9870-201ENSMUST00000063874 645 ntBASIC17■□□□□ 0.31
Sec61a1P61620 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a1P61620 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sec61a1P61620 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a1P61620 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a1P61620 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sec61a1P61620 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sec61a1P61620 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a1P61620 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.98■□□□□ 0.31
Sec61a1P61620 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.98■□□□□ 0.31
Sec61a1P61620 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a1P61620 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sec61a1P61620 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sec61a1P61620 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a1P61620 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a1P61620 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Sec61a1P61620 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sec61a1P61620 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a1P61620 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a1P61620 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a1P61620 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.96■□□□□ 0.31
Sec61a1P61620 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sec61a1P61620 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sec61a1P61620 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.95■□□□□ 0.3
Sec61a1P61620 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms