Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ythdf1P59326 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ythdf1P59326 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ythdf1P59326 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ythdf1P59326 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.78■□□□□ 0.6
Ythdf1P59326 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ythdf1P59326 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ythdf1P59326 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.78■□□□□ 0.6
Ythdf1P59326 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ythdf1P59326 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ythdf1P59326 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ythdf1P59326 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ythdf1P59326 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.77■□□□□ 0.6
Ythdf1P59326 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.77■□□□□ 0.6
Ythdf1P59326 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ythdf1P59326 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ythdf1P59326 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ythdf1P59326 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ythdf1P59326 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ythdf1P59326 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ythdf1P59326 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ythdf1P59326 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ythdf1P59326 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ythdf1P59326 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ythdf1P59326 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ythdf1P59326 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ythdf1P59326 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.76■□□□□ 0.59
Ythdf1P59326 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.76■□□□□ 0.59
Ythdf1P59326 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.76■□□□□ 0.59
Ythdf1P59326 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ythdf1P59326 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.75■□□□□ 0.59
Ythdf1P59326 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ythdf1P59326 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ythdf1P59326 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Gm11687-201ENSMUST00000118911 886 ntBASIC18.74■□□□□ 0.59
Ythdf1P59326 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.74■□□□□ 0.59
Ythdf1P59326 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ythdf1P59326 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ythdf1P59326 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.73■□□□□ 0.59
Ythdf1P59326 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ythdf1P59326 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.73■□□□□ 0.59
Ythdf1P59326 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.73■□□□□ 0.59
Ythdf1P59326 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.73■□□□□ 0.59
Ythdf1P59326 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ythdf1P59326 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Ythdf1P59326 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.72■□□□□ 0.59
Ythdf1P59326 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ythdf1P59326 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.72■□□□□ 0.59
Ythdf1P59326 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ythdf1P59326 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ythdf1P59326 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ythdf1P59326 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ythdf1P59326 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ythdf1P59326 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Ythdf1P59326 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ythdf1P59326 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ythdf1P59326 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ythdf1P59326 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ythdf1P59326 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ythdf1P59326 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms