Protein–RNA interactions for Protein: P56389

Cda, Cytidine deaminase, mousemouse

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CdaP56389 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CdaP56389 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
CdaP56389 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.39■□□□□ 0.37
CdaP56389 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CdaP56389 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CdaP56389 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CdaP56389 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CdaP56389 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CdaP56389 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.38■□□□□ 0.37
CdaP56389 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CdaP56389 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CdaP56389 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CdaP56389 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.38■□□□□ 0.37
CdaP56389 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CdaP56389 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CdaP56389 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.38■□□□□ 0.37
CdaP56389 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CdaP56389 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.38■□□□□ 0.37
CdaP56389 Golgb1-201ENSMUST00000023534 498 ntBASIC17.38■□□□□ 0.37
CdaP56389 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CdaP56389 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CdaP56389 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CdaP56389 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CdaP56389 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CdaP56389 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CdaP56389 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CdaP56389 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.36■□□□□ 0.37
CdaP56389 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.36■□□□□ 0.37
CdaP56389 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.36■□□□□ 0.37
CdaP56389 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CdaP56389 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CdaP56389 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CdaP56389 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CdaP56389 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CdaP56389 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CdaP56389 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CdaP56389 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CdaP56389 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CdaP56389 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CdaP56389 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CdaP56389 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.35■□□□□ 0.37
CdaP56389 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
CdaP56389 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CdaP56389 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CdaP56389 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CdaP56389 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CdaP56389 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CdaP56389 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CdaP56389 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CdaP56389 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CdaP56389 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CdaP56389 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CdaP56389 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CdaP56389 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CdaP56389 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CdaP56389 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CdaP56389 Gm12922-201ENSMUST00000120626 809 ntBASIC17.33■□□□□ 0.36
CdaP56389 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CdaP56389 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
CdaP56389 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CdaP56389 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.33■□□□□ 0.36
CdaP56389 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CdaP56389 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CdaP56389 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CdaP56389 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CdaP56389 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CdaP56389 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CdaP56389 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.32■□□□□ 0.36
CdaP56389 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CdaP56389 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CdaP56389 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.32■□□□□ 0.36
CdaP56389 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.32■□□□□ 0.36
CdaP56389 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.32■□□□□ 0.36
CdaP56389 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CdaP56389 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CdaP56389 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CdaP56389 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CdaP56389 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CdaP56389 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CdaP56389 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CdaP56389 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CdaP56389 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CdaP56389 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CdaP56389 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CdaP56389 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CdaP56389 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CdaP56389 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CdaP56389 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.31■□□□□ 0.36
CdaP56389 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.31■□□□□ 0.36
CdaP56389 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CdaP56389 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 682.2 ms