Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Nub1P54729 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nub1P54729 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nub1P54729 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nub1P54729 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.92■□□□□ 0.94
Nub1P54729 Gm43017-201ENSMUST00000198296 752 ntBASIC20.92■□□□□ 0.94
Nub1P54729 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nub1P54729 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nub1P54729 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nub1P54729 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Nub1P54729 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Nub1P54729 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nub1P54729 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.91■□□□□ 0.94
Nub1P54729 AA386476-201ENSMUST00000098781 1665 ntBASIC20.91■□□□□ 0.94
Nub1P54729 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Nub1P54729 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.9■□□□□ 0.94
Nub1P54729 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nub1P54729 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 Smad6-203ENSMUST00000179458 273 ntBASIC20.9■□□□□ 0.94
Nub1P54729 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.9■□□□□ 0.94
Nub1P54729 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nub1P54729 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nub1P54729 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nub1P54729 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.9■□□□□ 0.94
Nub1P54729 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Nub1P54729 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nub1P54729 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.89■□□□□ 0.93
Nub1P54729 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.89■□□□□ 0.93
Nub1P54729 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.89■□□□□ 0.93
Nub1P54729 Serp2-204ENSMUST00000228055 705 ntBASIC20.89■□□□□ 0.93
Nub1P54729 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nub1P54729 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nub1P54729 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nub1P54729 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nub1P54729 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.88■□□□□ 0.93
Nub1P54729 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nub1P54729 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nub1P54729 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nub1P54729 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nub1P54729 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Nub1P54729 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nub1P54729 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nub1P54729 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nub1P54729 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Nub1P54729 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nub1P54729 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nub1P54729 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.86■□□□□ 0.93
Nub1P54729 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nub1P54729 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.85■□□□□ 0.93
Nub1P54729 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.85■□□□□ 0.93
Nub1P54729 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nub1P54729 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nub1P54729 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Nub1P54729 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nub1P54729 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.85■□□□□ 0.93
Nub1P54729 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.85■□□□□ 0.93
Nub1P54729 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nub1P54729 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nub1P54729 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nub1P54729 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nub1P54729 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nub1P54729 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nub1P54729 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nub1P54729 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nub1P54729 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Nub1P54729 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nub1P54729 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nub1P54729 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms